Information for 11-GATAGGGTGATGG (Motif 20)

C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G
Reverse Opposite:
A G T C A G T C C T G A A G C T A G T C C G T A A G T C G T A C A T G C A C G T C G T A A C G T A G T C
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.914
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.9 +/- 27.1bp
Average Position of motif in Background27.8 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GATAGGGTGATGG
-GTGGGGTGAT--
 C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GATAGGGTGATGG
-ATGGGGTGAT--
 C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GATAGGGTGATGG
-ATGGGGTGAT--
 C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATAGGGTGATGG
-GTGGCGTGACNG
 C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GATAGGGTGATGG-
--CAGTGTGGTCGC
 C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G A C G T
A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GATAGGGTGATGG-
AGATGKDGAGATAAG
 A C G T C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GATAGGGTGATGG----
NNNNNATTGATGNGTGN
 C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GATAGGGTGATGG--
-----GTTAATGGCC
 C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GATAGGGTGATGG-
---AGGGTAACAGC
 C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G A C G T
A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GATAGGGTGATGG
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T C T A G C G T A A C G T C G T A A T C G A C T G A C T G A C G T A C T G C T G A A G C T C T A G A C T G
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G