Information for 7-CTCTCAGTCA (Motif 19)

A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A
Reverse Opposite:
A G C T A T C G C G T A A G T C A C G T A C T G C G T A C T A G C G T A A C T G
p-value:1e-6
log p-value:-1.552e+01
Information Content per bp:1.924
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif22.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets38.0 +/- 31.7bp
Average Position of motif in Background43.8 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CTCTCAGTCA
GSCTGTCACTCA
 A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTCTCAGTCA-
NCTGTCAATCAN
 A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTCTCAGTCA-
SCTGTCAVTCAV
 A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CTCTCAGTCA-
ACCACTCTCGGTCAC
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTCTCAGTCA
---TGAGTCA
 A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCAGTCA-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCTCAGTCA-
AGTATTCTCGGTTGC
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCTCAGTCA---
--ATGAGTCATCN
 A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A A C G T A C G T A C G T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCTCAGTCA---
--NTGAGTCATCN
 A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A A C G T A C G T A C G T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCTCAGTCA-
-DATGASTCAT
 A G T C A C G T A G T C A C G T A G T C C G T A A C T G A C G T A T G C C T G A A C G T
A C G T C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T