Information for 4-CCCAGGGTGGCTAGAG (Motif 12)

A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C A C G T C G T A A C T G A G T C G T A C C T G A G T A C A T G C A T G C A C G T A T C G A C T G A C T G
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 30.2bp
Average Position of motif in Background55.3 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf423/MA0116.1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCCAGGGTGGCTAGAG
GGCACCCAGGGGTGC-----
 A C G T A C G T A C G T A C G T A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCCAGGGTGGCTAGAG
ACCCCCCCGGGGGGN-----
 A C G T A C G T A C G T A C G T A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCCAGGGTGGCTAGAG
CACCCCCGGGGGGG-----
 A C G T A C G T A C G T A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCCAGGGTGGCTAGAG--
---NNCGTTGCTATGGNN
 A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCCAGGGTGGCTAGAG
CCCCCCCGGGGGGGT----
 A C G T A C G T A C G T A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CCCAGGGTGGCTAGAG-
-------TGTCTAGACG
 A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCCAGGGTGGCTAGAG
GTCCCCAGGGGA-------
 A C G T A C G T A C G T A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGGGTGGCTAGAG
TGCCCAGNHW--------
 A C G T A C G T A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CCCAGGGTGGCTAGAG--
------GRTGMTRGAGCC
 A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CCCAGGGTGGCTAGAG--
---NCCGTTGCTANGNGN
 A G T C A G T C T A G C C G T A A T C G A T C G A C T G A G C T A C T G A C T G A G T C A C G T G T C A A T C G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G