Information for 1-TGTGGTTTSCCTG (Motif 1)

A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A C T A G A C T G A T C G G T C A C T G A C G T A A G T C G T A C C G T A A G T C C G T A
p-value:1e-14
log p-value:-3.399e+01
Information Content per bp:1.839
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.7 +/- 30.3bp
Average Position of motif in Background55.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTSCCTG
NNTGTGGTTT-----
 A C G T A C G T A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTSCCTG
CTGTGGTTTN----
 A C G T A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTSCCTG
GTCTGTGGTTT-----
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTSCCTG
GCTGTGGTTT-----
 A C G T A C G T A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTSCCTG
NNHTGTGGTTWN----
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTSCCTG
TTTGCGGTTT-----
 A C G T A C G T A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTSCCTG
TTGCGGTTT-----
 A C G T A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTSCCTG
TGTGGATTNNN--
 A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTSCCTG
NNTGTGGATTSS---
 A C G T A C G T A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGTGGTTTSCCTG
-GGGGATTTCC--
 A C G T C T A G A C G T A C T G C T A G A C G T A G C T A C G T T A G C A G T C A G T C C G A T C T A G
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T