Information for 7-CCCCGTGTCTCAC (Motif 16)

A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
Reverse Opposite:
A C T G C A G T A C T G C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C T G C T A G A C T G
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.4 +/- 23.8bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCCCGTGTCTCAC----
-----TGTCTGDCACCT
 A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCCCGTGTCTCAC----
----CTGTCTGTCACCT
 A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCCGTGTCTCAC
GGCACGTGTC----
 A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCCGTGTCTCAC
NCCACGTG------
 A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCCGTGTCTCAC
GCCACGTG------
 A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCCGTGTCTCAC
GCACGTGTCNNNN
 A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

Creb3l2/MA0608.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCCGTGTCTCAC
GCCACGTGT-----
 A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGTGTCTCAC
GGCACGTGNC----
 A C G T A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCCGTGTCTCAC
-CACGTGDC----
 A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCCCGTGTCTCAC
GCACGTGT-----
 A G T C A G T C A G T C A G T C A C T G A C G T A C T G A C G T A G T C A C G T A G T C G C T A A G T C
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T