Information for 3-NTCTGTGGTTTTB (Motif 4)

G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
Reverse Opposite:
T C A G T C G A C G T A G T C A T C G A G T A C G T A C G T C A T A G C G T C A T C A G G T C A C T G A
p-value:1e-19
log p-value:-4.553e+01
Information Content per bp:1.624
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif9.96%
Number of Background Sequences with motif1488.2
Percentage of Background Sequences with motif3.10%
Average Position of motif in Targets42.9 +/- 24.5bp
Average Position of motif in Background49.9 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:NTCTGTGGTTTTB
-NNTGTGGTTT--
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:forward strand
Alignment:NTCTGTGGTTTTB
GTCTGTGGTTT--
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:NTCTGTGGTTTTB
--CTGTGGTTTN-
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NTCTGTGGTTTTB
-GCTGTGGTTT--
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:NTCTGTGGTTTTB
NNHTGTGGTTWN-
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:NTCTGTGGTTTTB
-TTTGCGGTTT--
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:NTCTGTGGTTTTB
--TTGCGGTTT--
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:NTCTGTGGTTTTB
TGCTGTGATTT--
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:NTCTGTGGTTTTB-
---TGTGGATTNNN
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.71
Offset:1
Orientation:forward strand
Alignment:NTCTGTGGTTTTB
-NNTGTGGATTSS
 G A C T C A G T A G T C A C G T A C T G C A G T A C T G A C T G A G C T A C G T A C G T A G C T A G T C
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G