Information for 10-TCAGCCCCGC (Motif 19)

A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C
Reverse Opposite:
T A C G A T G C A T C G C T A G T A C G C T A G A G T C C G A T T A C G C G T A
p-value:1e-6
log p-value:-1.519e+01
Information Content per bp:1.693
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif569.1
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets51.0 +/- 27.5bp
Average Position of motif in Background50.6 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCCCCGC
TGAGTCAGCA----
 A C G T A C G T A C G T A C G T A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCAGCCCCGC
TCAGTCTT--
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAGCCCCGC
-CAGCC----
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCAGCCCCGC-------
TACGCCCCGCCACTCTG
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCAGCCCCGC-----
SCAGYCADGCATGAC
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGCCCCGC----
--GGCCCCGCCCCC
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCAGCCCCGC-------
TAAGCCACGCCCCCTTT
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCAGCCCCGC-----
-NAGCCCCGCCCCCN
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCAGCCCCGC------
TCGACCCCGCCCCTAT
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCAGCCCCGC------
GCAGCCAAGCGTGACN
 A C G T A T G C G C T A T C A G A G T C A T G C G A T C A T G C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C