Information for 10-CCCCAGCTGGAGA (Motif 16)

A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A G T C A G T C C G T A A C T G A G T C A C G T A C T G A C T G C T A G C T A G
p-value:1e-7
log p-value:-1.656e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 15.1bp
Average Position of motif in Background82.3 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCCCAGCTGGAGA
NAHCAGCTGD---
 A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCCCAGCTGGAGA--
DCHCAGCAGGRGGCC
 A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCCCAGCTGGAGA
NAACAGCTGG---
 A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCCCAGCTGGAGA
CAGCAGCTGN---
 A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCCCAGCTGGAGA
-CACAGCAGGGGG
 A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCCCAGCTGGAGA
NNVCAGCTGB---
 A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGCTGGAGA
CCACACAGCAGGAGA
 A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCCCAGCTGGAGA
NNVVCAGCTGBN--
 A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCCCAGCTGGAGA
NAACAGCTGT---
 A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGCTGGAGA
CCACACAGCAGGAGA
 A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C T G A G T C A C G T C T A G A C T G C T G A A C T G C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A