Information for 7-TGCCACAGAT (Motif 10)

C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T
Reverse Opposite:
G T C A A G C T G A T C A C G T A C T G A C G T A C T G C T A G G T A C C G T A
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.837
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif136.3
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets55.8 +/- 31.6bp
Average Position of motif in Background47.6 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCCACAGAT--
ATGCAACAGGTGG
 A C G T C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCCACAGAT----
GAGCAACAGGTGGTT
 A C G T C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGCCACAGAT
AAACCACAGAN
 A C G T C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGCCACAGAT
TTGCAACATN-
 A C G T C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGCCACAGAT
NWAACCACADNN
 A C G T A C G T C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCCACAGAT---
---AACAGATGGT
 C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCCACAGAT
CGTGCCAAG---
 A C G T A C G T C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGCCACAGAT
---CACAGN-
 C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCCACAGAT
GGTGCCAAGT--
 A C G T A C G T C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCCACAGAT
AAACCACAGC-
 A C G T C G A T A C T G A G T C G T A C C G T A G T A C C G T A C A T G T C G A C A G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T