Information for 6-GGTTTCATAG (Motif 9)

C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G
Reverse Opposite:
A T G C A G C T T G C A A G C T C T A G C T G A C T G A C T G A G A T C G T A C
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.647
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif106.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets42.9 +/- 21.9bp
Average Position of motif in Background54.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTCATAG
TGGTTTCAGT-
 A C G T C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTTCATAG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GGTTTCATAG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTCATAG----
NNANTTTTATTGGNNN
 A C G T A C G T C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTTTCATAG
CGGTTTCAAA-
 A C G T C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGTTTCATAG--
DGWTTTATGRCN
 C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTTTCATAG-
-NTTTTATTGG
 C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G A C G T
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Arid3a/MA0151.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTTTCATAG
--TTTAAT--
 C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTTTCATAG-
-NTTTTATTGG
 C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G A C G T
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTTTCATAG--
--TTTTATTRGN
 C A T G C T A G A G C T A G C T G A C T A G T C T C G A A C G T C T G A T A C G A C G T A C G T
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A