Information for 2-CTGTGGTTTC (Motif 5)

G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
Reverse Opposite:
T A C G C G T A C G T A G T C A A G T C G T A C C T G A G T A C C T G A C A T G
p-value:1e-13
log p-value:-3.042e+01
Information Content per bp:1.817
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.29%
Number of Background Sequences with motif419.5
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets51.3 +/- 26.0bp
Average Position of motif in Background49.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTTTC
CTGTGGTTTN
 G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--CTGTGGTTTC
GTCTGTGGTTT-
 A C G T A C G T G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTTTC
NNTGTGGTTT-
 A C G T G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CTGTGGTTTC
GCTGTGGTTT-
 A C G T G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTTTC
NNHTGTGGTTWN
 A C G T A C G T G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGGTTTC
TTTGCGGTTT-
 A C G T G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTGTGGTTTC
TTGCGGTTT-
 G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGGTTTC
TGCTGTGATTT-
 A C G T A C G T G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CTGTGGTTTC---
---TGGTTTCAGT
 G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CTGTGGTTTC--
-TGTGGATTNNN
 G T A C G A C T C A T G G A C T A C T G T C A G A C G T G C A T A C G T A T G C A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A