Information for 10-CARCCAGCAGMCA (Motif 15)

G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T A C T G A G T C A G C T A C T G A C T G A G T C A C G T A C T G
p-value:1e-6
log p-value:-1.402e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.5 +/- 27.3bp
Average Position of motif in Background47.2 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CARCCAGCAGMCA-
------BCAGACWA
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CARCCAGCAGMCA-
------CCAGACAG
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CARCCAGCAGMCA---
------CCAGACRSVB
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CARCCAGCAGMCA
---CCAACTGCCA
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CARCCAGCAGMCA---
CGACCAACTGCCATGC
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CARCCAGCAGMCA
TGAGTCAGCA----
 A C G T G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CARCCAGCAGMCA-
--GCCAGCTGBTNB
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CARCCAGCAGMCA
--ANCAGCTG---
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CARCCAGCAGMCA----
-AACTAGCTGTCAATAC
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CARCCAGCAGMCA
---CCAACTGCCA
 G T A C C G T A C T A G A G T C A G T C C T G A T C A G A G T C C G T A A C T G G T A C A G T C C G T A
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A