Information for 4-CTAGACAAAATATGGT (Motif 12)

A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
Reverse Opposite:
C G T A T A G C G T A C G C T A A C G T C G T A G C A T A C G T G A C T A C G T A C T G C G A T A G T C C G A T C G T A A C T G
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.709
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif49.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets51.6 +/- 23.9bp
Average Position of motif in Background44.3 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTAGACAAAATATGGT
AAACAGACAAAGGAAT--
 A C G T A C G T A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTAGACAAAATATGGT
TACTGGAAAAAAAA----
 A C G T A C G T A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTAGACAAAATATGGT
AAAGTAAACAAAAATT---
 A C G T A C G T A C G T A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTAGACAAAATATGGT
GTTAAAAAAAAAAATTA
 A C G T A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTAGACAAAATATGGT
CAAAAGTAAACAAAG------
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTAGACAAAATATGGT
AAAAAGTAAACAAACAC----
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTAGACAAAATATGGT
AAAAAGTAAACAAACAC----
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTAGACAAAATATGGT
GTAAACAAT-------
 A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTAGACAAAATATGGT
AAGTAAACAAA-------
 A C G T A C G T A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTAGACAAAATATGGT
GTAAACAA--------
 A G T C C G A T C G T A C T A G C G T A G T A C C G T A C T G A C G T A C G T A G C A T C G T A C G A T C A T G A C T G C G A T
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T