Information for 2-GATCCAGGGTGCC (Motif 4)

A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G T A G C C G T A A G T C A G T C T G A C A G C T A C T G A C T G T C G A G A C T A G T C
p-value:1e-12
log p-value:-2.796e+01
Information Content per bp:1.782
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.1 +/- 25.4bp
Average Position of motif in Background53.0 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GATCCAGGGTGCC-----
--NNNGGGGCGCCCCCNN
 A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GATCCAGGGTGCC
ATTTCCCAGVAKSCY
 A C G T A C G T A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GATCCAGGGTGCC----
--------ATGCCCACC
 A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GATCCAGGGTGCC
-----AGCGCGCC
 A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GATCCAGGGTGCC
NNAGGGACAAGGGCNC-
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GATCCAGGGTGCC--
TGACCCAGTGACCTAC
 A C G T A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GATCCAGGGTGCC
--ANCAGGATGT-
 A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C
A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GATCCAGGGTGCC
GGCACCCAGGGGTGC
 A C G T A C G T A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GATCCAGGGTGCC
AAGGKGRCGCAGGCA---
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GATCCAGGGTGCC-------
----GGGTGTGCCCAAAAGG
 A C T G C G T A A C G T T A G C A G T C C T G A A C T G C T A G C T A G G C A T A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G