Information for 1-GAACCACGTCAAA (Motif 3)

A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A
Reverse Opposite:
G A C T C G A T A C G T C A T G G T C A A G T C A C T G A C G T A C T G A C T G G A C T A C G T A T G C
p-value:1e-12
log p-value:-2.955e+01
Information Content per bp:1.731
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.1 +/- 18.5bp
Average Position of motif in Background46.5 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAACCACGTCAAA
AAACCACANN---
 A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAACCACGTCAAA--
TAAGCCACTTGAATTT
 A C G T A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAACCACGTCAAA
-ATCCAC------
 A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAACCACGTCAAA
--GCCACGTG---
 A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAACCACGTCAAA
NWAACCACADNN--
 A C G T A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAACCACGTCAAA
AAACCACAGC---
 A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAACCACGTCAAA--
TAAGCCACTTAACATT
 A C G T A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAACCACGTCAAA
NAAACCACAG----
 A C G T A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAACCACGTCAAA
AAACCACAGAN--
 A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAACCACGTCAAA---
ATAACCACTTGAAAATT
 A C G T A T C G G T C A C G T A A G T C A G T C T C G A A G T C C T A G A C G T G T A C T G C A C G T A C G T A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T