Information for 2-GCCMTCTTGY (Motif 2)

C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T
Reverse Opposite:
C T G A T A G C C G T A C G T A C T A G G T C A C A T G A C T G C T A G A G T C
p-value:1e-12
log p-value:-2.964e+01
Information Content per bp:1.735
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.42%
Number of Background Sequences with motif506.7
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets55.3 +/- 24.6bp
Average Position of motif in Background49.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---GCCMTCTTGY
GCNGCCATCTTG-
 A C G T A C G T A C G T C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GCCMTCTTGY
GCCGCCATCTTG-
 A C G T A C G T A C G T C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GCCMTCTTGY-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCCMTCTTGY
GCCATCTGTT
 C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------GCCMTCTTGY---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GCCMTCTTGY-----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCCMTCTTGY---
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCMTCTTGY--
GCCAGCTGBTNB
 C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCMTCTTGY
ACCATCTGTT
 C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCMTCTTGY
CTGCCCGCA---
 A C G T A C G T C T A G A G T C A G T C G T A C A C G T A G T C A C G T G C A T A T C G G A C T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T