Information for 10-CCGCCGCGGC (Motif 19)

A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C
Reverse Opposite:
C A T G A G T C A T G C A C T G A G T C C A T G A C T G A T G C A T C G C T A G
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.731
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif13.58%
Number of Background Sequences with motif3725.2
Percentage of Background Sequences with motif7.81%
Average Position of motif in Targets51.2 +/- 26.2bp
Average Position of motif in Background50.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCGCCGCGGC--
GACCCCCCGCTGCGC
 A C G T A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCGCCGCGGC--
GACCCCCCGCTGTGC
 A C G T A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCGCGGC-
TCCCCTGGGGAC
 A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCGCCGCGGC-
GACCCCCCGCTGTG
 A C G T A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCGCCGCGGC-
TGCCCNNAGGGCA
 A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGCGGC-
TGCCCTGAGGGCA
 A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGCCGCGGC-
GACCCCCCGCGAAG
 A C G T A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGCGGC--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCGCGGC--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGCGGC-
TGCCCTGAGGGCA
 A C G T A C G T A G T C A T G C A T C G G T A C G T A C A C T G T G A C A T C G A C T G G T A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A