Information for 6-AWAATTATTTTTGTTA (Motif 13)

C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A
Reverse Opposite:
C G A T C G T A C G T A G T A C C G T A C T G A C G T A C G T A C G T A C G A T G T C A T C G A A C G T A C G T C G T A A G C T
p-value:1e-9
log p-value:-2.278e+01
Information Content per bp:1.795
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets32.7 +/- 13.8bp
Average Position of motif in Background30.4 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AWAATTATTTTTGTTA
--AATTATT-------
 C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AWAATTATTTTTGTTA--
-NNNNTTTTTTTTTNAAC
 C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AWAATTATTTTTGTTA-
--TTCTATTTTTAGNNN
 C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A A C G T
A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Lhx3/MA0135.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AWAATTATTTTTGTTA
GATTAATTAATTT-----
 A C G T A C G T C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AWAATTATTTTTGTTA---
----NTNTTGTTGTTTGTN
 C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AWAATTATTTTTGTTA
---KCTATTTTTRGH-
 C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AWAATTATTTTTGTTA
TTTAATTATAATTAAG-
 A C G T C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AWAATTATTTTTGTTA--
-GNATTTTTTTTTTGANC
 C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A A C G T A C G T
A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AWAATTATTTTTGTTA-
-AANTTATTGTTCTNNA
 C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A A C G T
A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PH0021.1_Dlx2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AWAATTATTTTTGTTA
GGAATAATTACCTCAG---
 A C G T A C G T A C G T C T G A G C A T C G T A C G T A A C G T C A G T C G T A A C G T A C G T A C G T A G C T C G A T A C T G G C A T C G A T C G T A
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G A C G T A C G T A C G T