Information for 8-AATGTCTTTGTATTGA (Motif 6)

C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C G T C T G A G T A C C G T A G T C A C G T A A C T G C G T A G T A C C G T A A C G T A C G T
p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 24.1bp
Average Position of motif in Background51.0 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AATGTCTTTGTATTGA
-----CTTTGT-----
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AATGTCTTTGTATTGA
----CCTTTGTTTT--
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AATGTCTTTGTATTGA-
------TGTGGATTNNN
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AATGTCTTTGTATTGA---
----CCATTGTATGCAAAT
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AATGTCTTTGTATTGA-
-ANTCCTTTGTCTNNNN
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AATGTCTTTGTATTGA---
--TNNTTTCGTATTNNANN
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AATGTCTTTGTATTGA
----CCATTGTTTT--
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AATGTCTTTGTATTGA
----NNTGTGGATTSS
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A
A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AATGTCTTTGTATTGA---
---NNANTTTTATTGGNNN
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AATGTCTTTGTATTGA-
TNNTCCTTTGTTCTNNT
 C G T A C G T A C G A T A C T G A C G T G T A C A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T T C A G C G T A A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T