Information for 5-TTTAAGTTTA (Motif 5)

C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
Reverse Opposite:
A C G T G T C A G T C A C G T A A G T C A G C T A C G T G T C A C T G A G C T A
p-value:1e-12
log p-value:-2.991e+01
Information Content per bp:1.840
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif65.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.9 +/- 29.8bp
Average Position of motif in Background48.2 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAGTTTA
ACTTTCACTTTC
 A C G T A C G T C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTAAGTTTA
AGTTTCAGTTTC
 A C G T A C G T C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTTTA
-TTAAGTGGN
 C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAGTTTA
RSTTTCRSTTTC
 A C G T A C G T C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

Nkx2-5/MA0063.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTTAAGTTTA
-TTAATTG--
 C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAGTTTA------
NTTTTAGTTAACNNAGN
 A C G T C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTTTA----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTAAGTTTA
AGTTTCAKTTTC
 A C G T A C G T C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTTTA
-TTAAGTGC-
 C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTTTA
-TTAAGTGGT
 C G A T A G C T A C G T G T C A C T G A C T A G A C G T A C G T A C G T G T C A
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T