Information for 3-TGCTGCCACC (Motif 2)

A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C
Reverse Opposite:
A T C G C A T G C G A T A C T G C T A G G A T C C T G A A T C G T G A C T G C A
p-value:1e-40
log p-value:-9.439e+01
Information Content per bp:1.652
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif12.88%
Number of Background Sequences with motif1230.1
Percentage of Background Sequences with motif2.57%
Average Position of motif in Targets47.3 +/- 25.5bp
Average Position of motif in Background49.7 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TGCTGCCACC-
--ATGCCAACC
 A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCCACC-----
ACTATGCCAACCTACC
 A C G T A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCTGCCACC-
--ATGCCCACC
 A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCTGCCACC
-CGTGCCAAG
 A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCTGCCACC-
--CTGCCCGCA
 A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGCCACC--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCACC
---TGCCAA-
 A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGCCACC--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCTGCCACC-
-GGTGCCAAGT
 A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCACC---
-GCCGCCATCTTG
 A C G T A C T G T A G C A G C T C T A G G A T C G T A C G C T A G T A C T A G C A C G T A C G T A C G T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G