Information for 3-CCCCCSCGCCKGG (Motif 5)

A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G
Reverse Opposite:
A T G C G A T C T G A C A C T G A T C G A T G C A T C G A T G C T C A G C T A G A T C G C A T G T A C G
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.747
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif681.9
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets43.1 +/- 24.0bp
Average Position of motif in Background51.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCCCSCGCCKGG-
GACCCCCCGCTGCGC
 A C G T A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCCCSCGCCKGG
--AGCGCGCC---
 A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCCCCSCGCCKGG
CCCCCGCCCCCGCC---
 A C G T A C G T A C G T A C G T A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCCCSCGCCKGG
--CCCCCCCC---
 A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G
A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCCCSCGCCKGG
GACCCCCCGCGAAG
 A C G T A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

ZNF740/MA0753.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCCCSCGCCKGG
CCCCCCCCAC----
 A C G T A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCCCSCGCCKGG-
GACCCCCCGCTGTGC
 A C G T A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCCCCSCGCCKGG----
---CCCCCCCGGGGGNN
 A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCCCSCGCCKGG
GCCCCGCCCCC---
 A C G T A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCCCCSCGCCKGG---
--GCCGCGCAGTGCGT
 A T G C G T A C A T G C A G T C A G T C A T C G T A G C A T C G A T G C T A G C A C T G C T A G A T C G A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T