Information for 19-GCGAAGCCGGGCG (Motif 43)

A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C T G A G T C
p-value:1e-4
log p-value:-1.125e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets74.7 +/- 5.4bp
Average Position of motif in Background61.3 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGAAGCCGGGCG
--GAGSCCGAGC-
 A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGAAGCCGGGCG
-NGAAGC------
 A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGAAGCCGGGCG--
NCGCAGCGGGGGGTC
 A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGAAGCCGGGCG--
-CACAGCGGGGGGTC
 A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGAAGCCGGGCG--
DCHCAGCAGGRGGCC
 A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCGAAGCCGGGCG-------
---NNNTNGGGCGTATNNTN
 A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCGAAGCCGGGCG--
NCNCAGCGGGGGGTC
 A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCGAAGCCGGGCG
GGCGGGGGCGGGGG
 A C G T A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCGAAGCCGGGCG--
ATAAAGGCGCGCGAT
 A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCGAAGCCGGGCG----
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C T G A G T C A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C