Information for 15-AGCTGAGGGTAGA (Motif 37)

C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T C G T A A G T C A G T C A G T C A C G T A G T C C G T A A T C G A G T C A C G T
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 15.0bp
Average Position of motif in Background50.1 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGCTGAGGGTAGA
---TNNGGGCAG-
 C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCTGAGGGTAGA
-TATGCGGGTA--
 C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCTGAGGGTAGA
-CATGCGGGTAC-
 C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGCTGAGGGTAGA---
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGAGGGTAGA-
NNNNATGCGGGTNNNN
 A C G T A C G T C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGAGGGTAGA
HCAGCTGDTN-----
 A C G T A C G T C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGCTGAGGGTAGA
CACAGCGGGGGGTC--
 A C G T A C G T A C G T C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGAGGGTAGA
CAGGTGAGG-----
 A C G T C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AGCTGAGGGTAGA
GGTCANYTGAGGWCA--
 A C G T A C G T A C G T A C G T C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCTGAGGGTAGA
GACAGCTGCAG-----
 A C G T A C G T A C G T C G T A C T A G A T G C A C G T C T A G C G T A A C T G A C T G A C T G A C G T C G T A A C T G C T G A
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T