Information for 15-ASAGCYCDCHKGTGCB (Motif 35)

T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T
Reverse Opposite:
T C G A T A C G T A G C C G T A A T G C G T C A C T G A A C T G G C T A C A T G C T A G A C T G A T G C A G C T A T G C A C G T
p-value:1e-7
log p-value:-1.765e+01
Information Content per bp:1.616
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif94.5
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets55.1 +/- 26.1bp
Average Position of motif in Background53.2 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ASAGCYCDCHKGTGCB--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ASAGCYCDCHKGTGCB--
TAGCGCCCCCTGGTGGCCA
 A C G T T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ASAGCYCDCHKGTGCB
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ASAGCYCDCHKGTGCB
----NNVVCAGCTGBN
 T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T
A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:ASAGCYCDCHKGTGCB
--------CAGCTGNT
 T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.61
Offset:7
Orientation:forward strand
Alignment:ASAGCYCDCHKGTGCB-
-------VCAGCTGBNN
 T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ASAGCYCDCHKGTGCB
------CGCAGCTGCG
 T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ASAGCYCDCHKGTGCB
------NNCAGGTGTN
 T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ASAGCYCDCHKGTGCB----
---CTCAGCAGCTGCTACTG
 T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ASAGCYCDCHKGTGCB----
---ATCCACAGGTGCGAAAA
 T G C A T A C G T C G A T A C G G T A C A G T C G T A C C G A T A G T C G A C T A C G T T A C G C G A T A C T G A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A