Information for 9-CAGCAWKAGTGAC (Motif 23)

A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
Reverse Opposite:
A C T G A G C T G A T C G T C A G T A C G A C T G T C A G C A T A C G T A C T G G A T C G C A T A C T G
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.568
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif6.38%
Number of Background Sequences with motif1075.4
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets52.2 +/- 21.9bp
Average Position of motif in Background51.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGCAWKAGTGAC
TCAGNGAGCGTGAC
 A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAWKAGTGAC
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAWKAGTGAC
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCAWKAGTGAC
CACAGCAGGGGG---
 A C G T A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAWKAGTGAC
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAWKAGTGAC
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAWKAGTGAC
CACAGN---------
 A C G T A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAGCAWKAGTGAC
ACAGGAAGTG----
 A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CAGCAWKAGTGAC
CTGAGTCAGCAATTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAWKAGTGAC
HWWGTCAGCAWWTTT---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G T G A C G T C A C G T A C A G T C T G A C A T G C A G T C A T G T C G A T G A C
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T