Information for 7-GCAAGGATCTTGA (Motif 21)

A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A
Reverse Opposite:
A C G T A G T C G T C A G T C A A C T G T C G A A C G T A G T C A G T C A C G T A C G T A T C G A G T C
p-value:1e-9
log p-value:-2.223e+01
Information Content per bp:1.922
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.3 +/- 29.0bp
Average Position of motif in Background47.8 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCAAGGATCTTGA-
---ATGACCTTGAA
 A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A A C G T
A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCAAGGATCTTGA
--AAGGATATNTN
 A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCAAGGATCTTGA
--NATGACCTTGA
 A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A
A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCAAGGATCTTGA-
CTACTAGGATGTNNTN
 A C G T A C G T A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCAAGGATCTTGA-
TCAGNGAGCGTGAC
 A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCAAGGATCTTGA---
-BCNGGTTCTAGANCN
 A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A A C G T A C G T A C G T
A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCAAGGATCTTGA
---ATGACCTTGA
 A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGGATCTTGA---
NNNNATGACCTTGANTN
 A C G T A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCAAGGATCTTGA--------
-GAAGTANCACGAATNMRAGT
 A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCAAGGATCTTGA-
----TGACCTTGAV
 A C T G A T G C C G T A C G T A A C T G A C T G C G T A A G C T A G T C A C G T A C G T A C T G T G C A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A