Information for 6-GAGGTTTTCTCCC (Motif 17)

A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
Reverse Opposite:
A C T G A C T G A T C G C G T A A C T G C G T A C G T A C G T A C G T A A G T C A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 21.0bp
Average Position of motif in Background55.6 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTTTTCTCCC-
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGGTTTTCTCCC
GGGGATTCCCCC-
 A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGTTTTCTCCC
GGGGATTTCC---
 A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGGTTTTCTCCC
NGGGGATTTCCC--
 A C G T A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GAGGTTTTCTCCC
---CNGTCCTCCC
 A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTTTTCTCCC
NNTGTGGTTT------
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAGGTTTTCTCCC
GGGAATTTCC---
 A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GAGGTTTTCTCCC
GGGGATTTCC---
 A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTTTTCTCCC
TTGCGGTTT------
 A C G T A C G T A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:GAGGTTTTCTCCC
------TTTTCCA
 A C T G C G T A A C T G A C T G G A C T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A