Information for 4-ACGGACHACAGAA (Motif 15)

T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A
Reverse Opposite:
A C G T A G C T A T G C A C G T A T C G A C G T C A G T T A C G A C G T A G T C G A T C T A C G A G C T
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.710
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets38.6 +/- 25.7bp
Average Position of motif in Background45.1 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACGGACHACAGAA
-NWAACCACADNN
 T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACGGACHACAGAA
--AAACCACAGAN
 T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACGGACHACAGAA
--AAACCACAGC-
 T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACGGACHACAGAA--
-AAGATAAGATAACA
 T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A A C G T A C G T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACGGACHACAGAA
-NAAACCACAG--
 T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ACGGACHACAGAA-
--GGACCACCCACG
 T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACGGACHACAGAA
--AAACCACANN-
 T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACGGACHACAGAA---
NNNAGATCAAAGGANNN
 A C G T T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACGGACHACAGAA
AGAGRRACAGCWGAC
 A C G T A C G T T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACGGACHACAGAA---
NANAGATCAAAGGGNNN
 A C G T T C G A A G T C C T A G C T A G G T C A A T G C G T C A C G T A T A G C C G T A A T C G C T G A T C G A A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T