Information for 3-GAAATTAGCT (Motif 11)

T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T
Reverse Opposite:
C G T A T A C G G A T C G C A T T C G A C T G A C G A T A C G T A G C T A T G C
p-value:1e-10
log p-value:-2.503e+01
Information Content per bp:1.683
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif7.38%
Number of Background Sequences with motif1228.9
Percentage of Background Sequences with motif2.52%
Average Position of motif in Targets45.5 +/- 25.1bp
Average Position of motif in Background48.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0045.1_Hoxa1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GAAATTAGCT---
ACGGTAATTAGCTCAG
 A C G T A C G T A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T A C G T A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

PH0024.1_Dlx5/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GAAATTAGCT---
GGGGTAATTAGCTCTG
 A C G T A C G T A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T A C G T A C G T A C G T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

PH0074.1_Hoxd1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GAAATTAGCT---
TAAACTAATTAGCTGTA
 A C G T A C G T A C G T A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T A C G T A C G T A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

Dlx1/MA0879.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAAATTAGCT
CCTAATTATC-
 A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAAATTAGCT---
AAGGTAATTAGCTCAT
 A C G T A C G T A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T A C G T A C G T A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

PH0052.1_Hoxa5/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAAATTAGCT---
ACGGTAATTAGCTCAG
 A C G T A C G T A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T A C G T A C G T A C G T
T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G

GBX2/MA0890.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAATTAGCT
ACCAATTAGC-
 A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T
T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C A C G T

GBX1/MA0889.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAAATTAGCT
ACTAATTAGC-
 A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T
T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C A C G T

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GAAATTAGCT--
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PH0081.1_Pdx1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAAATTAGCT---
AAGGTAATTAGCTCAT
 A C G T A C G T A C G T T A C G T C G A G T C A G C T A G A C T A G C T C G T A C T A G A T G C C G A T A C G T A C G T A C G T
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T