Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-94 | -2.182e+02 | 0.0000 | 123.0 | 16.04% | 569.8 | 1.19% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-61 | -1.409e+02 | 0.0000 | 177.0 | 23.08% | 2534.3 | 5.30% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-59 | -1.372e+02 | 0.0000 | 197.0 | 25.68% | 3223.1 | 6.74% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-58 | -1.338e+02 | 0.0000 | 175.0 | 22.82% | 2602.0 | 5.44% | motif file (matrix) |
svg |
5 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-45 | -1.058e+02 | 0.0000 | 142.0 | 18.51% | 2130.3 | 4.46% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-36 | -8.355e+01 | 0.0000 | 137.0 | 17.86% | 2442.1 | 5.11% | motif file (matrix) |
svg |
7 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-34 | -7.904e+01 | 0.0000 | 179.0 | 23.34% | 4087.4 | 8.55% | motif file (matrix) |
svg |
8 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-32 | -7.535e+01 | 0.0000 | 73.0 | 9.52% | 758.8 | 1.59% | motif file (matrix) |
svg |
9 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-26 | -6.102e+01 | 0.0000 | 308.0 | 40.16% | 10859.0 | 22.72% | motif file (matrix) |
svg |
10 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-22 | -5.245e+01 | 0.0000 | 87.0 | 11.34% | 1546.1 | 3.23% | motif file (matrix) |
svg |
11 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-21 | -4.911e+01 | 0.0000 | 76.0 | 9.91% | 1274.3 | 2.67% | motif file (matrix) |
svg |
12 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-20 | -4.778e+01 | 0.0000 | 102.0 | 13.30% | 2190.9 | 4.58% | motif file (matrix) |
svg |
13 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-20 | -4.740e+01 | 0.0000 | 56.0 | 7.30% | 729.1 | 1.53% | motif file (matrix) |
svg |
14 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-20 | -4.718e+01 | 0.0000 | 85.0 | 11.08% | 1612.4 | 3.37% | motif file (matrix) |
svg |
15 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-20 | -4.687e+01 | 0.0000 | 83.0 | 10.82% | 1553.0 | 3.25% | motif file (matrix) |
svg |
16 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-20 | -4.683e+01 | 0.0000 | 47.0 | 6.13% | 512.9 | 1.07% | motif file (matrix) |
svg |
17 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-20 | -4.645e+01 | 0.0000 | 96.0 | 12.52% | 2014.2 | 4.21% | motif file (matrix) |
svg |
18 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-20 | -4.610e+01 | 0.0000 | 116.0 | 15.12% | 2773.6 | 5.80% | motif file (matrix) |
svg |
19 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-19 | -4.598e+01 | 0.0000 | 75.0 | 9.78% | 1314.5 | 2.75% | motif file (matrix) |
svg |
20 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-19 | -4.449e+01 | 0.0000 | 95.0 | 12.39% | 2038.7 | 4.27% | motif file (matrix) |
svg |
21 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-18 | -4.204e+01 | 0.0000 | 66.0 | 8.60% | 1121.3 | 2.35% | motif file (matrix) |
svg |
22 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-18 | -4.159e+01 | 0.0000 | 85.0 | 11.08% | 1768.9 | 3.70% | motif file (matrix) |
svg |
23 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-17 | -4.085e+01 | 0.0000 | 75.0 | 9.78% | 1444.0 | 3.02% | motif file (matrix) |
svg |
24 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-17 | -4.074e+01 | 0.0000 | 99.0 | 12.91% | 2311.4 | 4.84% | motif file (matrix) |
svg |
25 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-17 | -4.056e+01 | 0.0000 | 83.0 | 10.82% | 1728.8 | 3.62% | motif file (matrix) |
svg |
26 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-17 | -3.982e+01 | 0.0000 | 76.0 | 9.91% | 1505.7 | 3.15% | motif file (matrix) |
svg |
27 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-16 | -3.786e+01 | 0.0000 | 62.0 | 8.08% | 1092.3 | 2.29% | motif file (matrix) |
svg |
28 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-13 | -3.101e+01 | 0.0000 | 149.0 | 19.43% | 4917.9 | 10.29% | motif file (matrix) |
svg |
29 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-12 | -2.987e+01 | 0.0000 | 144.0 | 18.77% | 4754.3 | 9.95% | motif file (matrix) |
svg |
30 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-12 | -2.962e+01 | 0.0000 | 34.0 | 4.43% | 437.3 | 0.91% | motif file (matrix) |
svg |
31 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-11 | -2.617e+01 | 0.0000 | 46.0 | 6.00% | 865.6 | 1.81% | motif file (matrix) |
svg |
32 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-11 | -2.605e+01 | 0.0000 | 61.0 | 7.95% | 1396.5 | 2.92% | motif file (matrix) |
svg |
33 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-10 | -2.508e+01 | 0.0000 | 50.0 | 6.52% | 1031.1 | 2.16% | motif file (matrix) |
svg |
34 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-9 | -2.160e+01 | 0.0000 | 28.0 | 3.65% | 413.4 | 0.86% | motif file (matrix) |
svg |
35 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-7 | -1.825e+01 | 0.0000 | 238.0 | 31.03% | 10636.6 | 22.25% | motif file (matrix) |
svg |
36 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.530e+01 | 0.0000 | 20.0 | 2.61% | 306.2 | 0.64% | motif file (matrix) |
svg |
37 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.476e+01 | 0.0000 | 12.0 | 1.56% | 111.1 | 0.23% | motif file (matrix) |
svg |
38 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.457e+01 | 0.0000 | 13.0 | 1.69% | 135.9 | 0.28% | motif file (matrix) |
svg |
39 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-5 | -1.375e+01 | 0.0000 | 21.0 | 2.74% | 370.7 | 0.78% | motif file (matrix) |
svg |
40 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-5 | -1.339e+01 | 0.0000 | 9.0 | 1.17% | 65.5 | 0.14% | motif file (matrix) |
svg |
41 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-5 | -1.330e+01 | 0.0000 | 18.0 | 2.35% | 289.0 | 0.60% | motif file (matrix) |
svg |
42 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-5 | -1.237e+01 | 0.0000 | 7.0 | 0.91% | 39.5 | 0.08% | motif file (matrix) |
svg |
43 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-5 | -1.198e+01 | 0.0001 | 44.0 | 5.74% | 1315.6 | 2.75% | motif file (matrix) |
svg |
44 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-4 | -1.079e+01 | 0.0002 | 52.0 | 6.78% | 1742.7 | 3.65% | motif file (matrix) |
svg |
45 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-4 | -1.055e+01 | 0.0002 | 47.0 | 6.13% | 1531.1 | 3.20% | motif file (matrix) |
svg |
46 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.051e+01 | 0.0002 | 211.0 | 27.51% | 10182.4 | 21.30% | motif file (matrix) |
svg |
47 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-4 | -1.039e+01 | 0.0002 | 72.0 | 9.39% | 2723.8 | 5.70% | motif file (matrix) |
svg |
48 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-4 | -1.025e+01 | 0.0003 | 15.0 | 1.96% | 264.4 | 0.55% | motif file (matrix) |
svg |
49 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-4 | -9.736e+00 | 0.0004 | 33.0 | 4.30% | 965.4 | 2.02% | motif file (matrix) |
svg |
50 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.435e+00 | 0.0006 | 45.0 | 5.87% | 1513.8 | 3.17% | motif file (matrix) |
svg |
51 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-3 | -9.072e+00 | 0.0008 | 59.0 | 7.69% | 2202.7 | 4.61% | motif file (matrix) |
svg |
52 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-3 | -9.072e+00 | 0.0008 | 59.0 | 7.69% | 2202.7 | 4.61% | motif file (matrix) |
svg |
53 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -9.024e+00 | 0.0008 | 54.0 | 7.04% | 1965.4 | 4.11% | motif file (matrix) |
svg |
54 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.839e+00 | 0.0010 | 44.0 | 5.74% | 1508.4 | 3.16% | motif file (matrix) |
svg |
55 |
| GFY(?)/Promoter/Homer | 1e-3 | -8.712e+00 | 0.0011 | 9.0 | 1.17% | 119.2 | 0.25% | motif file (matrix) |
svg |
56 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-3 | -8.523e+00 | 0.0013 | 70.0 | 9.13% | 2797.1 | 5.85% | motif file (matrix) |
svg |
57 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -8.516e+00 | 0.0013 | 24.0 | 3.13% | 651.8 | 1.36% | motif file (matrix) |
svg |
58 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-3 | -8.270e+00 | 0.0016 | 124.0 | 16.17% | 5674.2 | 11.87% | motif file (matrix) |
svg |
59 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-3 | -8.261e+00 | 0.0016 | 48.0 | 6.26% | 1740.0 | 3.64% | motif file (matrix) |
svg |
60 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-3 | -8.210e+00 | 0.0016 | 26.0 | 3.39% | 748.4 | 1.57% | motif file (matrix) |
svg |
61 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.936e+00 | 0.0021 | 8.0 | 1.04% | 106.0 | 0.22% | motif file (matrix) |
svg |
62 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.522e+00 | 0.0032 | 87.0 | 11.34% | 3787.0 | 7.92% | motif file (matrix) |
svg |
63 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.175e+00 | 0.0044 | 18.0 | 2.35% | 469.3 | 0.98% | motif file (matrix) |
svg |
64 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.168e+00 | 0.0044 | 17.0 | 2.22% | 430.9 | 0.90% | motif file (matrix) |
svg |
65 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-3 | -7.160e+00 | 0.0044 | 48.0 | 6.26% | 1831.5 | 3.83% | motif file (matrix) |
svg |
66 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -6.585e+00 | 0.0076 | 59.0 | 7.69% | 2440.0 | 5.10% | motif file (matrix) |
svg |
67 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.355e+00 | 0.0094 | 97.0 | 12.65% | 4483.9 | 9.38% | motif file (matrix) |
svg |
68 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -6.276e+00 | 0.0101 | 10.0 | 1.30% | 202.1 | 0.42% | motif file (matrix) |
svg |
69 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -6.081e+00 | 0.0121 | 34.0 | 4.43% | 1244.2 | 2.60% | motif file (matrix) |
svg |
70 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-2 | -5.972e+00 | 0.0133 | 29.0 | 3.78% | 1016.7 | 2.13% | motif file (matrix) |
svg |
71 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.663e+00 | 0.0178 | 8.0 | 1.04% | 151.1 | 0.32% | motif file (matrix) |
svg |
72 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.582e+00 | 0.0190 | 40.0 | 5.22% | 1581.5 | 3.31% | motif file (matrix) |
svg |
73 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.489e+00 | 0.0206 | 31.0 | 4.04% | 1148.8 | 2.40% | motif file (matrix) |
svg |
74 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -5.449e+00 | 0.0212 | 6.0 | 0.78% | 93.6 | 0.20% | motif file (matrix) |
svg |
75 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.426e+00 | 0.0214 | 22.0 | 2.87% | 731.0 | 1.53% | motif file (matrix) |
svg |
76 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.393e+00 | 0.0218 | 15.0 | 1.96% | 427.9 | 0.90% | motif file (matrix) |
svg |
77 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.304e+00 | 0.0235 | 63.0 | 8.21% | 2801.3 | 5.86% | motif file (matrix) |
svg |
78 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.196e+00 | 0.0258 | 10.0 | 1.30% | 237.0 | 0.50% | motif file (matrix) |
svg |
79 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.048e+00 | 0.0296 | 41.0 | 5.35% | 1685.6 | 3.53% | motif file (matrix) |
svg |
80 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -4.971e+00 | 0.0316 | 50.0 | 6.52% | 2158.1 | 4.51% | motif file (matrix) |
svg |
81 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -4.873e+00 | 0.0344 | 50.0 | 6.52% | 2170.5 | 4.54% | motif file (matrix) |
svg |
82 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -4.869e+00 | 0.0344 | 40.0 | 5.22% | 1653.3 | 3.46% | motif file (matrix) |
svg |
83 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.816e+00 | 0.0355 | 28.0 | 3.65% | 1059.3 | 2.22% | motif file (matrix) |
svg |