Information for 6-TCCTGCCCTTGCA (Motif 9)

A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A
Reverse Opposite:
A C G T A T C G A T G C C G T A C T G A A C T G A C T G A T C G A G T C C G T A A C T G A C T G T C G A
p-value:1e-15
log p-value:-3.581e+01
Information Content per bp:1.859
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.6 +/- 24.7bp
Average Position of motif in Background49.2 +/- 41.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCCTGCCCTTGCA
-BNTGDCCTTG--
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCCTGCCCTTGCA---
-GCTGACCTTGAACTN
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A A C G T A C G T A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TCCTGCCCTTGCA
---TGACCTTGAN
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TCCTGCCCTTGCA
---TGACCTTGAV
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCCTGCCCTTGCA
--CTGACCTTTG-
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCCTGCCCTTGCA
--NTGACCTTGA-
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCCCTTGCA--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCCTGCCCTTGCA
--ATGACCTTGA-
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TCCTGCCCTTGCA--
---TGACCTTGACCT
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCCTGCCCTTGCA
--CTGCCCGCA--
 A C G T A G T C A G T C A C G T A C T G A T G C A G T C A G T C A G C T A C G T A T C G A T G C G T C A
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T