Information for 14-ATGCCCTCGA (Motif 32)

C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A
Reverse Opposite:
A G C T G T A C A C T G C G T A A C T G A C T G A C T G A G T C C T G A A C G T
p-value:1e-7
log p-value:-1.750e+01
Information Content per bp:1.915
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif124.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets54.6 +/- 19.3bp
Average Position of motif in Background54.0 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATGCCCTCGA
ATGCCCACC-
 C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGCCCTCGA-
ATGACCTTGAA
 C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A A C G T
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGCCCTCGA
-TGACCTYA-
 C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATGCCCTCGA
NATGACCTTGA
 A C G T C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGCCCTCGA-
-TGACCTTGAN
 C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGCCCTCGA-
-TGACCTTGAV
 C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATGCCCTCGA
ATGACCTTGA
 C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGCCCTCGA
NTGACCTTGA
 C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATGCCCTCGA---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGCCCTCGA-
-TGACCTTGAT
 C G T A A G C T A C T G A G T C A G T C A G T C A C G T A G T C A C T G C T G A A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T