Information for 3-AAGGTCAACT (Motif 3)

G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T
Reverse Opposite:
G C T A A T C G C A G T C A G T A C T G T C G A G A T C G T A C G A C T C A G T
p-value:1e-32
log p-value:-7.499e+01
Information Content per bp:1.675
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif13.56%
Number of Background Sequences with motif1588.7
Percentage of Background Sequences with motif3.32%
Average Position of motif in Targets49.1 +/- 24.7bp
Average Position of motif in Background51.5 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AAGGTCAACT
AAGGTCAC--
 G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTCAACT
TCAAGGTCAN--
 A C G T A C G T G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAACT
TCAAGGTCAT--
 A C G T A C G T G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAACT-
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAACT-
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AAGGTCAACT
TRAGGTCA---
 A C G T G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---AAGGTCAACT
ATCAAGGTCA---
 A C G T A C G T A C G T G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAACT--
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAACT-
CAAAGGTCAAGGG
 A C G T A C G T G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AAGGTCAACT
-AGGTCA---
 G T C A C T G A C A T G C T A G A G C T T G A C G T C A G T C A T A G C C G A T
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T