Information for 5-TTGCCCTAGG (Motif 5)

A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G
Reverse Opposite:
G A T C G A T C G A C T C G T A C T A G C T A G A C T G T G A C G C T A T C G A
p-value:1e-24
log p-value:-5.629e+01
Information Content per bp:1.674
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif11.44%
Number of Background Sequences with motif1446.6
Percentage of Background Sequences with motif3.02%
Average Position of motif in Targets53.4 +/- 27.1bp
Average Position of motif in Background48.7 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTGCCCTAGG----
NTGCCCTAGGGCAA
 A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G A C G T A C G T A C G T A C G T
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTAGG---
-TGCCCTNGGGCA
 A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G A C G T A C G T A C G T
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTAGG---
-TGCCCTNGGGCA
 A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G A C G T A C G T A C G T
A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTGCCCTAGG----
NTGCCCTTGGGCGN
 A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G A C G T A C G T A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTGCCCTAGG---
-TGCCCNGGGGCA
 A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G A C G T A C G T A C G T
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TTGCCCTAGG--
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTGCCCTAGG
CTGACCTTTG
 A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCCTAGG----
NTNGCCTCAGGCNNN
 A C G T A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G A C G T A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGCCCTAGG--
ATGCCCTGAGGC
 A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G A C G T A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCCTAGG
BNTGDCCTTG-
 A C G T A G C T C G A T A C T G T G A C G A T C G A T C G C A T C T G A C T A G C T A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T