Information for 4-WTGACCTTTA (Motif 4)

G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A
Reverse Opposite:
C G A T C T G A C T G A C G T A C A T G C T A G A G C T A T G C C G T A C G A T
p-value:1e-25
log p-value:-5.927e+01
Information Content per bp:1.612
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif13.06%
Number of Background Sequences with motif1769.7
Percentage of Background Sequences with motif3.69%
Average Position of motif in Targets55.4 +/- 23.9bp
Average Position of motif in Background50.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.94
Offset:-3
Orientation:reverse strand
Alignment:---WTGACCTTTA---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.93
Offset:1
Orientation:forward strand
Alignment:WTGACCTTTA---
-TGACCTTTNCNT
 G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---WTGACCTTTA---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:WTGACCTTTA
ATGACCTTGA
 G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.89
Offset:0
Orientation:forward strand
Alignment:WTGACCTTTA
NTGACCTTGA
 G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-WTGACCTTTA
NATGACCTTGA
 A C G T G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:WTGACCTTTA-
-TGACCTTGAT
 G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----WTGACCTTTA---
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---WTGACCTTTA
CNNTTGACCTTTG
 A C G T A C G T A C G T G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:WTGACCTTTA
GTGACCTT--
 G C T A G C A T T A C G C T G A G A T C G T A C G C A T G A C T G A C T G C T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T