Information for 21-TGCGCTTTGGCAA (Motif 31)

A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G A G T C A G T C G T C A C G T A C G T A A T C G A G T C A T C G A G T C C G T A
p-value:1e-7
log p-value:-1.710e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 22.3bp
Average Position of motif in Background72.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGCGCTTTGGCAA-
----NNTTGGCANN
 A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGCGCTTTGGCAA-
-----NTTGGCANN
 A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TGCGCTTTGGCAA
-----CTTGGCAA
 A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:forward strand
Alignment:TGCGCTTTGGCAA
------TTGGCA-
 A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCTTTGGCAA
NTGCCCTTGGGCGN
 A C G T A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCTTTGGCAA
TTGCGGTTT-----
 A C G T A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGCGCTTTGGCAA
NNTGTTTATTTTGGCA-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCGCTTTGGCAA
TTTGCGGTTT-----
 A C G T A C G T A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCTTTGGCAA
CTGACCTTTG----
 A C G T A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCGCTTTGGCAA
NTGCCCTAGGGCAA
 A C G T A C G T A C T G A T G C A C T G A T G C A C G T A C G T A C G T A C T G A C T G A G T C C G T A C T G A
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A