Information for 9-ATCTTAATYWYCT (Motif 13)

C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T
Reverse Opposite:
G C T A C T A G T C A G C G A T T C A G C T G A G A C T G A C T G T C A C G T A C T A G G T C A A C G T
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.658
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.86%
Number of Background Sequences with motif987.9
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets46.5 +/- 28.2bp
Average Position of motif in Background48.8 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------ATCTTAATYWYCT
CCNNACCATCTGGCCTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTAATYWYCT
NAACATCTGGATN----
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATCTTAATYWYCT
ATATTAATTAA--
 C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTAATYWYCT--
NAATTTTATTACCTNN
 A C G T C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATCTTAATYWYCT
AACATCTGGA------
 A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTAATYWYCT
YSTTATCT---------
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTAATYWYCT--
NNAATTAATGACCNNN
 A C G T C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTAATYWYCT---
ACATCTGGWWTYAATTAR
 A C G T A C G T C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T A C G T A C G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ATCTTAATYWYCT
TNTTATCTTATCTT---
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATCTTAATYWYCT
-TTTTTATTGC--
 C G T A A C G T A G T C A C G T A C G T C T G A C T G A A G C T A G C T C G T A A G T C G A T C C A G T
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T