Information for 12-CCAGCGCACG (Motif 19)

A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C T A G A G T C A C T G A G T C A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.689e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 26.2bp
Average Position of motif in Background61.2 +/- 50.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCAGCGCACG---
-NCGCGGACGTTG
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAGCGCACG
-CAGCC----
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCAGCGCACG--
----BGCACGTA
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCAGCGCACG---
-----GCACGTAY
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCAGCGCACG---
-----GCACGTNC
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAGCGCACG---
-CTGCGCATGCGC
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCAGCGCACG---
--TGCGCAGGCGC
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCAGCGCACG----
----GGCACGCGTC
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCAGCGCACG-----
-----GCACGTACCC
 A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCGCACG----
NNTTTGCACACGGCCC
 A C G T A C G T A G T C A G T C C G T A A C T G A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C