Information for 9-TCAGACTGAA (Motif 34)

A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A
Reverse Opposite:
G A C T A G C T G T A C C G T A A C T G C G A T A T G C C G A T A C T G G T C A
p-value:1e-5
log p-value:-1.378e+01
Information Content per bp:1.778
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif191.8
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets55.6 +/- 26.2bp
Average Position of motif in Background51.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TCAGACTGAA----
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TCAGACTGAA--
BAGTCATANTGAAAG
 A C G T A C G T A C G T A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

POL002.1_INR/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCAGACTGAA
-NNNANTGA-
 A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCAGACTGAA
BCAGACWA--
 A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCAGACTGAA
CCAGACAG--
 A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCAGACTGAA
CCAGACRSVB
 A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCAGACTGAA--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCAGACTGAA-
NAGGTCACNNTGACC
 A C G T A C G T A C G T A C G T A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCAGACTGAA----
----ACTGAAACCA
 A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TCAGACTGAA
AGGTGNCAGACAG--
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A A T C G G C T A A G T C A C G T A C T G C T G A C T G A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T