Information for 20-TCTGCTTCAWTTT (Motif 29)

A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A C G A T A C G T C T A G T C G A C T G A T C A G A T G C C G T A A T C G C G T A
p-value:1e-8
log p-value:-1.903e+01
Information Content per bp:1.816
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.5 +/- 21.7bp
Average Position of motif in Background58.4 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTGCTTCAWTTT--
TCAGTTTCATTTTCC
 A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T A C G T A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCTTCAWTTT--
ACATCTGGWWTYAATTAR
 A C G T A C G T A C G T A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T A C G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

PH0090.1_Lbx2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCTGCTTCAWTTT------
--TGCATTAATTAATGCGA
 A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G G T A C G T C A G A C T G A C T C G T A T C G A A G C T C G A T C T G A C T G A A G C T A C T G T A G C C T A G T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCTTCAWTTT
VBSYGTCTGG--------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCTGCTTCAWTTT
--TGATTAAATTA
 A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T
A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCTGCTTCAWTTT--
TNAGTTTCGATTTTN
 A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCTGCTTCAWTTT-
--AGTTTCAKTTTC
 A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T A C G T
A C G T A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCTGCTTCAWTTT
--TGAGTCATTTC
 A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T
A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCTGCTTCAWTTT
TGTGACTCATT--
 A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T

PH0110.1_Nkx1-2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCTGCTTCAWTTT------
--TGNACTAATTAGTGNAN
 A C G T A T G C A C G T A T C G A G T C G A C T A G C T G A T C C G T A C G T A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G G A T C T G C A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A G C T A C T G T G A C G T C A G T A C