Information for 18-GCTGCCTTGAGTT (Motif 26)

A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C C G A T A G T C C G T A C G T A A C T G A C T G T A G C C G T A A C T G A G T C
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.2 +/- 15.4bp
Average Position of motif in Background36.8 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCTTGAGTT
NGCTN---------
 A C G T A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCTGCCTTGAGTT---
-----CTTGAGTGGCT
 A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCCTTGAGTT-
GCTGACCTTGAACTN
 A C G T A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCTGCCTTGAGTT
-TGACCTTGAN--
 A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTGCCTTGAGTT
GCTCCG-------
 A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCTGCCTTGAGTT
-CTGCCCGCA---
 A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GCTGCCTTGAGTT--
------TTGACTTTT
 A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTGCCTTGAGTT
GCTTCC-------
 A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCTGCCTTGAGTT
-TGACCTTGACCT
 A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T
A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCTGCCTTGAGTT--
-NTGCCCANNGGTNA
 A C T G A G T C A C G T A T C G A G T C A G T C A C G T C G A T A C T G C G T A A C T G A G C T A C G T A C G T A C G T
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A