Information for 13-GAAAKTTTCTAAACTT (Motif 15)

C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T
Reverse Opposite:
C T G A C T G A C T A G G A C T A C G T C G A T G C T A C T A G T C G A G T C A G T C A G T A C C G A T A G C T A C G T A G T C
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.726
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.0 +/- 26.3bp
Average Position of motif in Background53.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GAAAKTTTCTAAACTT
--------YTAATCCY
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GAAAKTTTCTAAACTT-
-------NYTAATCCYB
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GAAAKTTTCTAAACTT
-------GCTAATCC-
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GAAAKTTTCTAAACTT---
--------CTAATCCTCTT
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GAAAKTTTCTAAACTT
--------TTAATCCT
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAAAKTTTCTAAACTT-----
----NTTGTTAATCCCTCTNN
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GAAAKTTTCTAAACTT
--------TTAATCCC
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GAAAKTTTCTAAACTT
-------TCTTATCT-
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAAAKTTTCTAAACTT-
---AGATTCTTATCTGT
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T A C G T
A C G T A C G T A C G T C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GAAAKTTTCTAAACTT
-------CTTAATCCC
 C T A G G T C A C T G A C G T A C A T G A C G T A C G T A C G T A G T C C A G T C G T A C G T A C G T A A G T C A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C