Information for 9-AAGGCCAGCATAATTC (Motif 13)

C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
Reverse Opposite:
C T A G C T G A C G T A A C G T C G A T C T G A A C G T A T C G A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
p-value:1e-11
log p-value:-2.607e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 34.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAGGCCAGCATAATTC
AAGTTCAAGGTCAGC-------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGGCCAGCATAATTC
CAAGGHCANV-------
 A C G T C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGGCCAGCATAATTC
HWWGTCAGCAWWTTT-
 C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGGCCAGCATAATTC
CAAAGGTCAG--------
 A C G T A C G T C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCAGCATAATTC
NTCAAGGTCA---------
 A C G T A C G T A C G T C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCAGCATAATTC
BTCAAGGTCA---------
 A C G T A C G T A C G T C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGGCCAGCATAATTC
-AAGTCAGCANTTTTN
 C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGGCCAGCATAATTC
AAGGTCAC--------
 C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGGCCAGCATAATTC
AAGGCAAGTGT-----
 C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AAGGCCAGCATAATTC----
-----TATCATAATTAAGGA
 C G T A C G T A A C T G C T A G G T A C A G T C C G T A A C T G A T G C G T C A A G C T C G T A C G T A A C G T A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A