Information for 3-CTCACCAGSAGCS (Motif 7)

A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C
Reverse Opposite:
A T C G A C T G A G T C A C G T A T G C A G T C A C G T A C T G A C T G A C G T A C T G C G T A A C T G
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.923
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.0 +/- 18.2bp
Average Position of motif in Background59.5 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCACCAGSAGCS
CCTCACCTG-----
 A C G T A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCACCAGSAGCS-
DCHCAGCAGGRGGCC
 A C G T A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCACCAGSAGCS
CACAGCAGGGGG-
 A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCACCAGSAGCS----
CTCAGCAGCTGCTACTG
 A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCACCAGSAGCS----
ATCCACAGGTGCGAAAA
 A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTCACCAGSAGCS
NNACTTACCTN-----
 A C G T A C G T A C G T A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTCACCAGSAGCS
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTCACCAGSAGCS
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCACCAGSAGCS
NNCACCTGNN---
 A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCACCAGSAGCS---
ATGTACAGTAGCAAAG
 A G T C A C G T A G T C G T C A A G T C A G T C C G T A A C T G A T C G C G T A A C T G A G T C A T G C A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G