Information for 2-TGGKACACACAGA (Motif 6)

A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C T G A C G T A T C G A C G T A C T G A C G T G T C A A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.546e+01
Information Content per bp:1.857
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.4 +/- 33.1bp
Average Position of motif in Background42.2 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:TGGKACACACAGA
-------CACAGN
 A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGKACACACAGA
TGGGGCCCAC---
 A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGGKACACACAGA
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGKACACACAGA
-GGACCACCCACG
 A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TGGKACACACAGA
------ACAAAG-
 A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGGKACACACAGA-
AGCGGCACACACGCAA
 A C G T A C G T A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGKACACACAGA
NDGTAAACARRN-
 A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGGKACACACAGA
CCAGGAACAG-----
 A C G T A C G T A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGKACACACAGA--
AAAGTAAACAAAAATT
 A C G T A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGGKACACACAGA-
---AAACCACAGAN
 A C G T C T A G A C T G C A G T G T C A G T A C C G T A A T G C C G T A A G T C C G T A A C T G C T G A A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C