Information for 3-GGTCMKTWMCCWYGGG (Motif 4)

A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C T G A C G T A A C T G A C T G A C T G C G T A C G T A G T C A A C G T A C T G C G T A A T G C A G T C
p-value:1e-11
log p-value:-2.598e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.6 +/- 14.2bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGTCMKTWMCCWYGGG
AGGTCANTGACCTN---
 A C G T A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGTCMKTWMCCWYGGG---
-----ANTCCCTNGGGAAT
 A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGTCMKTWMCCWYGGG-
-----GTCCCCAGGGGA
 A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GGTCMKTWMCCWYGGG---
-------TCCCNNGGGACN
 A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTCMKTWMCCWYGGG
AGGTCTCTAACC-----
 A C G T A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGTCMKTWMCCWYGGG----
-----NTCCCCTCAGGGANT
 A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGTCMKTWMCCWYGGG----
-----NTCGCCTCAGGCAAT
 A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTCMKTWMCCWYGGG
AGGTCA-----------
 A C G T A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGTCMKTWMCCWYGGG-
-----WTGSCCTSAGGS
 A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGTCMKTWMCCWYGGG-
-----ATGCCCTGAGGC
 A C T G A T C G A C G T A G T C G T C A A C G T A C G T G C A T G T A C A G T C A G T C C G A T A G C T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C