Information for 2-GGCTGWGAAATCAAGA (Motif 3)

C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
Reverse Opposite:
C A G T A G T C A G C T A C G T C T A G T G C A A G C T A G C T G A C T G T A C C G T A G A T C G C T A A T C G A T G C G T A C
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.663
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif69.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets46.0 +/- 25.0bp
Average Position of motif in Background49.4 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGCTGWGAAATCAAGA
GAAAAGGTGTGAAAATT---
 A C G T A C G T A C G T A C G T C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCTGWGAAATCAAGA
-GCTGTG---------
 C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGCTGWGAAATCAAGA
AGGTGTGAAA------
 C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGCTGWGAAATCAAGA
AAGGTGTGAAAAT----
 A C G T C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCTGWGAAATCAAGA---
CNGCTGNNGNNNNCAGATAA
 A C G T C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A A C G T A C G T A C G T
T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCTGWGAAATCAAGA
TAGGTGTGAAG------
 A C G T C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCTGWGAAATCAAGA
AAGGTGTKAA-------
 A C G T C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGCTGWGAAATCAAGA
-CSTGGGAAAD-----
 C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGCTGWGAAATCAAGA--
-AAGGCGAAATCATCGCA
 C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A A C G T A C G T
A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGCTGWGAAATCAAGA
TGCTGAGTCATC----
 C A T G A T C G T A G C C G A T C A T G C G A T A C T G C T G A T C G A T C G A A C G T A G T C T C G A C T G A A C T G G T C A
G C A T A T C G G T A C G C A T C A T G G C T A T A C G C G A T G T A C G C T A A G C T A T G C A C G T A C G T A C G T A C G T