Information for 13-TCAGCGAGATGCA (Motif 23)

A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C G T A G T C A C G T A G T C A C T G A G T C A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.451e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 27.0bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCGAGATGCA
GTCAGCANNTN---
 A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCGAGATGCA
NGTCAGCANTTT---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCGAGATGCA
DCTCAGCAGG-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCAGCGAGATGCA-
TTGACCGAGAATTCC
 A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCGAGATGCA
TGAGTCAGCA-------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCGAGATGCA
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TCAGCGAGATGCA
CTGAGTCAGCAATTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCAGCGAGATGCA-
CTTATCTGTGAGGAGCAG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T
T G A C G A C T C G A T C G T A A C G T A G T C G C A T A T C G A C G T T C A G G T C A T A C G T C A G G C T A T C A G T G A C C G T A A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TCAGCGAGATGCA
-CAGCC-------
 A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCAGCGAGATGCA
HWWGTCAGCAWWTTT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T