Information for 7-AGTGTGCTTT (Motif 22)

C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.451e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.3 +/- 13.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGTGCTTT-
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGTGCTTT-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTGTGCTTT-
-CTGTGGTTTN
 C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTGTGCTTT
NNTGTGGTTT
 C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGTGTGCTTT-
NNHTGTGGTTWN
 A C G T C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGTGTGCTTT-
-CTGTTCCTGG
 C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGCTTT
GTCTGTGGTTT
 A C G T C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTGTGCTTT----
NNATTGGACTTTNGNN
 A C G T A C G T C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGTGCTTT
GCTGTGGTTT
 C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGTGTGCTTT
-GTGACCTT-
 C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T